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Gut Microbiome: The Next Frontier for Boosting Growth in Aquaculture?

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By Milthon Lujan

A proposed framework for the screening and application of beneficial microbes and/or probiotics to improve production in aquaculture. Source: Zhang et al., (2024); Reviews in Aquaculture.
A proposed framework for the screening and application of beneficial microbes and/or probiotics to improve production in aquaculture. Source: Zhang et al., (2024); Reviews in Aquaculture.

The search for sustainable and efficient aquaculture practices is paramount. While significant advances have been made, one crucial element remains largely untapped: the fascinating world of the gut microbiome.

This microscopic community within aquatic animals plays a fundamental role in their overall health, performance, and, most importantly, growth. A recent scientific review published in the journal Reviews in Aquaculture by scientists from the Institute of Hydrobiology at the Chinese Academy of Sciences and Huazhong Agricultural University delves into the potential of manipulating the gut microbiome to enhance growth rates in aquaculture.

The Link Between Growth Rate and the Gut Microbiome

While genetic factors have long been recognized as key determinants of growth rates in aquaculture, recent studies suggest that the gut microbiome also plays a significant role. Fast-growing individuals may harbor distinct gut microbial communities compared to their slower-growing counterparts.

Understanding these differences can provide valuable insights into the underlying mechanisms of growth divergence and inform targeted interventions to improve growth performance.

The Importance of a Healthy Gut Microbiome

A balanced gut microbiome is essential for optimal health and productivity in aquatic animals. It can:

  • Modulate immunity: A healthy microbiome helps strengthen the immune system, reducing susceptibility to diseases.
  • Improve water quality: The microbiome can help degrade harmful substances in the farming environment, improving water quality.
  • Enhance physiological functions: Beneficial gut microbes can support various physiological processes such as nutrient absorption and digestion.
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The Power of Microbes: Linking the Gut Microbiome with Growth

The scientific review highlights the remarkable diversity and variability of gut microbiomes in different aquatic species and even among individuals. Despite this variation, a clear trend emerges: changes in gut microbiome composition are closely related to variations in growth rates.

Growth Rate and Microbiome Diversity: A Link Emerges

The study delves further and explores the connection between gut microbiome composition and differing growth rates in various aquatic species. Their analysis reveals a clear correlation: changes in growth rates correspond to significant changes in the gut microbiome. Interestingly, the research focuses primarily on carnivorous fish and non-fish species such as shrimp and sea cucumbers.

Unlocking Potential: A New Frontier for Aquaculture

This research paves the way for a new frontier in aquaculture: understanding and manipulating the gut microbiome to optimize growth. It opens the door to:

  • Better understanding of animal growth: By studying the gut microbiome in relation to growth rates, we can gain valuable insights into the underlying mechanisms driving healthy development.
  • Probiotic potential: The study emphasizes the potential to detect and identify “host-derived probiotics,” beneficial bacteria specific to each aquatic animal species. These probiotics can then be used to promote a healthy gut environment and support optimal growth.
  • Microbiome modulation strategies: The review highlights the need for further research on microbiome modulation strategies. This could involve dietary adjustments, prebiotics (food for beneficial bacteria), or specific probiotic supplements.

Addressing Knowledge Gaps and Moving Forward

To fully harness the potential of the microbiome in aquaculture, future research should:

  • Conduct more comparative studies: Explore microbiome differences between fast-growing and slow-growing individuals.
  • Integrate multi-omics technologies: Utilize advanced techniques such as genomics, metabolomics, and transcriptomics for a deeper understanding.
  • Develop practical applications: Translate research findings into viable strategies for aquaculture.
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Conclusion

The gut microbiome holds great promise for improving aquaculture productivity. By unraveling its mysteries, we can develop targeted interventions to enhance the growth and health of farmed aquatic animals.

The main conclusions of the study are:

  • Growth correlation: There is a correlation between gut microbiome composition and an individual’s growth rate.
  • Modulation potential: Manipulating the gut microbiome could potentially enhance growth in aquaculture.
  • Research gaps: Despite progress, our understanding of the microbiome’s specific role in growth and the underlying mechanisms remains limited.

As we look toward a future where gut microbiome research is at the forefront of aquaculture practices, we can usher in a new era of sustainable and efficient production, ensuring a healthy and abundant supply of seafood for future generations.

The study was funded by the National Natural Science Foundation of China, the Youth Innovation Promotion Association of the Chinese Academy of Sciences, and the National Key Research and Development Program.

Contact
Shouqi Xie
Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture, Institute of Hydrobiology, Chinese Academy of Sciences
Wuhan, China
Email: sqxie@ihb.ac.cn

Reference (open access)
Zhang, Z., Yang, Q., Liu, H., Jin, J., Yang, Y., Zhu, X., Han, D., Zhou, Z., & Xie, S. Potential Functions of the Gut Microbiome and Modulation Strategies for Improving Aquatic Animal Growth. Reviews in Aquaculture. https://doi.org/10.1111/raq.12959